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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10592340_10594042_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10592340 - 10594042

Intron Length:
1703

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTTTG

5'SS Class:
strong_major

3'SS Sequence:
TCCTCCTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCTAT

U12 Branch Point Sequence:
TATAGCTGATGT

Flanking Amino Acid:
DGLLADGSKEGLSALLEFAE

Intron Amino Acid Position:
156

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.8
0.77
0.9
74.8
38.1

Major BPS
68.8
0.47
1.3
66.7
41.7

Major PPT
75.3
0.57
0.9
72.2
32.4

Minor 5ss
37.9
-1.4
2.9
40.9
45.3

Minor BPS
42.1
-0.5
2.3
62.83
46.6

Associated Gene:

Gene:
OAZ2

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10589843 - 10602802
12960

10589843 - 10600989
11147