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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10678718_10681447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10678718 - 10681447

Intron Length:

2730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

GTTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTGCTCTCATCT

Flanking Amino Acid:

DIRGIFRYCNTWPVAIALLA

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.3

77.8

38.7

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

83.9

0.76

0.8

77.6

31.1

Minor 5ss

36.1

-1.6

3.1

49.5

40.1

Minor BPS

47.9

-0

1.8

65.01

45.5

Associated Gene:

Gene:

SORD

Ensembl Gene ID:

ENSAPLG00000004875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005050

10666368 - 10682091

15724