Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10685455_10685666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10685455 - 10685666

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAT

5'SS Class:

major

3'SS Sequence:

GTCCCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTTAA

U12 Branch Point Sequence:

ACAGAGGTAACG

Flanking Amino Acid:

NVVKAELLPSGVTHLRFQRP

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.6

43.3

Major BPS

60.9

0.27

51.6

Major PPT

72.5

0.51

0.8

62.1

34.8

Minor 5ss

31.4

-2.1

3.6

47.4

Minor BPS

35.5

-1.2

2.5

38.94

44.2

Associated Gene:

Gene:

DUOX2

Ensembl Gene ID:

ENSAPLG00000005182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005395

10683952 - 10702131

18180