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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10700174_10701309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10700174 - 10701309

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAC

U12 Branch Point Sequence:

TGGCCCCACACC

Flanking Amino Acid:

NLLHHGRGSVGARLLRLLPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

47.2

-0.1

52.2

32.7

Major PPT

67.1

0.39

57.5

43.2

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

41.6

-0.6

2.3

53.23

Associated Gene:

Gene:

DUOX2

Ensembl Gene ID:

ENSAPLG00000005182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005395

10683952 - 10702131

18180