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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10818948_10819218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10818948 - 10819218

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TGCCTCTAAATT

Flanking Amino Acid:

VTHMLEDVLEDIGRDPLVTG

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

82.3

0.73

0.8

74.1

36.6

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

54.5

0.22

1.7

69.3

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048267

10810341 - 10834833

24493

ENSAPLT00000046558

10810341 - 10835504

25164