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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10819347_10819931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10819347 - 10819931

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTACCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTACCCTTACAG

Flanking Amino Acid:

PWGNIVYGYATCEDAEAYEL

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.2

81.5

32.7

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

77.7

0.62

0.9

69.8

35.9

Minor 5ss

37.6

-1.4

3.3

48.3

41.3

Minor BPS

55.5

0.04

1.8

63.4

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005904

10810847 - 10834833

23987

ENSAPLT00000048267

10810341 - 10834833

24493

ENSAPLT00000046558

10810341 - 10835504

25164