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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10829187_10831102_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10829187 - 10831102

Intron Length:

1916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

ACTGGTTTATCG

Flanking Amino Acid:

HWTNAVDIHVGSCRSEKFFA

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

91.3

0.93

0.6

84.1

30.8

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

44.3

-0.5

2.1

48.56

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005904

10810847 - 10834833

23987

ENSAPLT00000048267

10810341 - 10834833

24493

ENSAPLT00000046558

10810341 - 10835504

25164