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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10841440_10851003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10841440 - 10851003

Intron Length:

9564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCTTTTTTATCT

Flanking Amino Acid:

SYLLSIRPQNSLSSSRFSLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.8

0.6

0.9

77.1

37.1

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

62.4

0.47

1.6

75.62

41.6

Associated Gene:

Gene:

ALPK3

Ensembl Gene ID:

ENSAPLG00000028618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022154

10841273 - 10874996

33724