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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10861371_10862599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10861371 - 10862599

Intron Length:

1229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TCATGCAGAGCT

Flanking Amino Acid:

HGNRHTLQLYKCREEDAGIY

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

76.8

33.7

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

85.5

0.8

0.9

76.9

42.1

Minor 5ss

31.3

-2.1

2.7

33.6

35.4

Minor BPS

42.3

-0.5

2.2

62.86

46.5

Associated Gene:

Gene:

ALPK3

Ensembl Gene ID:

ENSAPLG00000028618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031096

10841273 - 10874996

33724

ENSAPLT00000022154

10841273 - 10874996

33724