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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10869926_10871380_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10869926 - 10871380

Intron Length:

1455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTGC

5'SS Class:

major

3'SS Sequence:

TGATTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTGCTCTGATTT

Flanking Amino Acid:

DEIPVAEAQRSAGDEGQAAL

Intron Amino Acid Position:

1238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

64.1

43.4

Major BPS

0.72

38.9

Major PPT

82.1

0.72

0.9

73.7

41.5

Minor 5ss

49.7

-0

2.6

68.4

42.6

Minor BPS

49.8

0.07

1.7

69.76

41.5

Associated Gene:

Gene:

ALPK3

Ensembl Gene ID:

ENSAPLG00000028618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031096

10841273 - 10874996

33724

ENSAPLT00000022154

10841273 - 10874996

33724