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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10871509_10871779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10871509 - 10871779

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGAACCCTGACT

Flanking Amino Acid:

DSTDFLLSPEVLSGFILREE

Intron Amino Acid Position:

1281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

75.9

0.58

0.9

66.4

40.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

57.6

0.32

1.8

75.03

Associated Gene:

Gene:

ALPK3

Ensembl Gene ID:

ENSAPLG00000028618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031096

10841273 - 10874996

33724

ENSAPLT00000022154

10841273 - 10874996

33724