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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10872198_10872525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10872198 - 10872525

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTGAATCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

CCTGCTTGAATC

Flanking Amino Acid:

IEKNYDITIQECKIQNSSRE

Intron Amino Acid Position:

1385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

73.2

0.52

62.7

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

51.9

0.04

1.6

58.09

41.8

Associated Gene:

Gene:

ALPK3

Ensembl Gene ID:

ENSAPLG00000028618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031096

10841273 - 10874996

33724

ENSAPLT00000022154

10841273 - 10874996

33724