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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10873289_10873393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10873289 - 10873393

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGAGGCTGAGTG

Flanking Amino Acid:

TNVRIATNLKGYQGLKESCF

Intron Amino Acid Position:

1503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

71.9

33.8

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

0.36

1.1

60.9

44.7

Minor 5ss

27.1

-2.6

26.1

Minor BPS

36.8

-1.1

1.9

33.41

40.6

Associated Gene:

Gene:

ALPK3

Ensembl Gene ID:

ENSAPLG00000028618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031096

10841273 - 10874996

33724

ENSAPLT00000022154

10841273 - 10874996

33724