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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10875549_10875838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10875549 - 10875838

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TAGGCCTGACCG

Flanking Amino Acid:

IYTCCKQLFASTVLENGTLS

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

51.1

0.03

1.2

39.9

Major PPT

87.1

0.84

0.7

84.7

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

47.5

-0.3

1.9

53.23

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006146

10875209 - 10884089

8881

ENSAPLT00000041791

10875431 - 10884089

8659