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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10876395_10876721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10876395 - 10876721

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TTTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

AGGATCTGACTT

Flanking Amino Acid:

SSIGIMLGGLTSLVPHRKSD

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

40.1

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

32.1

-2

3.3

36.6

41.6

Minor BPS

44.9

-0.3

1.7

56.23

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041791

10875431 - 10884089

8659

ENSAPLT00000018784

10875716 - 10880656

4941

ENSAPLT00000006146

10875209 - 10884089

8881