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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10878135_10879327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10878135 - 10879327

Intron Length:

1193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAT

U12 Branch Point Sequence:

AGTGCCTGAGCC

Flanking Amino Acid:

SVMGAYISFGIDAASLIAAS

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

49.3

-0

1.3

58.2

40.4

Major PPT

74.7

0.56

0.9

68.4

37.3

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

50.1

-0

1.8

62.85

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041791

10875431 - 10884089

8659

ENSAPLT00000006146

10875209 - 10884089

8881