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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10881859_10882214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10881859 - 10882214

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAC

U12 Branch Point Sequence:

CTCTCTGTGACA

Flanking Amino Acid:

CFQKSWRWLKWLLIVVLLGG

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

0.27

1.2

55.4

41.7

Major PPT

0.77

0.8

77.8

35.6

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

51.7

0.05

2.1

65.36

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006146

10875209 - 10884089

8881

ENSAPLT00000041791

10875431 - 10884089

8659