Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10882933_10883056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10882933 - 10883056

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

TGACTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

TGGTGTGTGACT

Flanking Amino Acid:

EGKGRVSSYCRKALQPASKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

70.9

0.47

0.9

62.1

39.6

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

45.5

-0.2

2.4

66.97

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006146

10875209 - 10884089

8881

ENSAPLT00000041791

10875431 - 10884089

8659