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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1096642_1098054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1096642 - 1098054

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TTGTGCTGAAAT

Flanking Amino Acid:

AIATNGFVRGGGAYYLISRS

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

61.3

0.28

30.6

Major PPT

86.1

0.81

0.8

80.9

31.1

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

56.2

0.27

78.26

43.6

Associated Gene:

Gene:

SLC12A1

Ensembl Gene ID:

ENSAPLG00000007672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008056

1085515 - 1134105

48591