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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1098195_1098621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1098195 - 1098621

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TTACTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTTACT

Flanking Amino Acid:

FAETVVELLKESDTIMVDES

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

81.4

0.71

0.9

41.9

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

0.84

1.5

91.27

31.8

Associated Gene:

Gene:

SLC12A1

Ensembl Gene ID:

ENSAPLG00000007672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008056

1085515 - 1134105

48591