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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11023371_11024149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11023371 - 11024149

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTACCACTAATA

Flanking Amino Acid:

MLLIASKARLAPPSDNKTDF

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

80.3

0.68

0.8

73.1

37.3

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

0.03

1.9

68.29

37.3

Associated Gene:

Gene:

SPPL2A

Ensembl Gene ID:

ENSAPLG00000014658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028252

11018280 - 11044036

25757

ENSAPLT00000015336

11018280 - 11043993

25714