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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11082216_11082819_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11082216 - 11082819

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCACAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TATTCAGTATAT

Flanking Amino Acid:

AWIITGGVNTGVAKHVGDAL

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

58.9

0.2

1.1

52.4

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

-0.3

2.4

71.91

44.3

Associated Gene:

Gene:

TRPM7

Ensembl Gene ID:

ENSAPLG00000015254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015958

11057110 - 11170816

113707