Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_11092115_11092253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11092115 - 11092253

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGGGG

5'SS Class:

major

3'SS Sequence:

CCTTTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AGTTCTGTAAGT

Flanking Amino Acid:

FQTAADEIPMEVFKEVRILD

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

53.3

43.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.8

0.67

0.8

77.9

29.3

Minor 5ss

28.8

-2.4

3.5

35.1

43.4

Minor BPS

51.2

0.12

2.3

74.64

42.4

Associated Gene:

Gene:

TRPM7

Ensembl Gene ID:

ENSAPLG00000015254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015958

11057110 - 11170816

113707