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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11099148_11101197_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11099148 - 11101197

Intron Length:

2050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CACTGTGTCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTTTTCAATT

Flanking Amino Acid:

DNNVEFGAFVGHRDSMELQR

Intron Amino Acid Position:

1446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

55.5

0.12

1.1

54.3

39.2

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

65.2

0.55

1.5

79.05

Associated Gene:

Gene:

TRPM7

Ensembl Gene ID:

ENSAPLG00000015254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015958

11057110 - 11170816

113707