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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11105838_11106467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11105838 - 11106467

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGACT

5'SS Class:

strong_major

3'SS Sequence:

TATTGTAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTATTGTAATA

Flanking Amino Acid:

SIPFTPVPPRGEPVTVYRLE

Intron Amino Acid Position:

1603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

35.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.1

0.43

63.3

41.8

Minor 5ss

34.3

-1.8

3.3

49.5

46.5

Minor BPS

49.1

-0

63.8

37.1

Associated Gene:

Gene:

TRPM7

Ensembl Gene ID:

ENSAPLG00000015254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015958

11057110 - 11170816

113707