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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11122227_11122774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11122227 - 11122774

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTCTGTTTAATT

Flanking Amino Acid:

NRNLYQDDINRSNFLGHKGE

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

80.8

33.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

73.9

0.54

69.1

41.5

Minor 5ss

42.6

-0.8

57.9

46.3

Minor BPS

62.1

0.46

1.8

75.88

41.7

Associated Gene:

Gene:

USP8

Ensembl Gene ID:

ENSAPLG00000001449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024603

11118158 - 11135817

17660

ENSAPLT00000001904

11118158 - 11135817

17660