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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11122988_11123584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11122988 - 11123584

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGTTCG

5'SS Class:

major

3'SS Sequence:

TTCTTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCTTCCTTACAG

Flanking Amino Acid:

PVTPAVNRENKPIYYTKAEI

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

67.8

38.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

89.3

0.88

0.6

24.2

Minor 5ss

48.3

-0.1

2.3

59.1

39.6

Minor BPS

62.7

0.26

1.8

68.4

44.9

Associated Gene:

Gene:

USP8

Ensembl Gene ID:

ENSAPLG00000001449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024603

11118158 - 11135817

17660

ENSAPLT00000001904

11118158 - 11135817

17660