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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11126373_11127485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11126373 - 11127485

Intron Length:

1113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTTAT

U12 Branch Point Sequence:

CTTTCTGTTACA

Flanking Amino Acid:

PVSSTRSIPEVDRTKKPSIK

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

55.8

0.14

1.4

49.4

Major PPT

85.1

0.79

0.8

79.4

32.6

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

50.6

0.01

2.3

70.62

41.9

Associated Gene:

Gene:

USP8

Ensembl Gene ID:

ENSAPLG00000001449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024603

11118158 - 11135817

17660

ENSAPLT00000001904

11118158 - 11135817

17660