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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1112686_1112771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1112686 - 1112771

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTCCTCCTAACA

Flanking Amino Acid:

TAVEDHVKNFRPQCIVLTGA

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

77.6

0.62

0.8

73.4

30.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

61.5

0.36

1.7

73.2

38.4

Associated Gene:

Gene:

SLC12A1

Ensembl Gene ID:

ENSAPLG00000007672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008056

1085515 - 1134105

48591