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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11130247_11130939_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11130247 - 11130939

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TATTCTGTACAC

Flanking Amino Acid:

ERRDQSESLSGAVTAEKLFA

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.56

1.1

72.9

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

46.9

-0.2

2.3

64.36

41.3

Associated Gene:

Gene:

USP8

Ensembl Gene ID:

ENSAPLG00000001449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001904

11118158 - 11135817

17660

ENSAPLT00000024603

11118158 - 11135817

17660