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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1116898_1118581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1116898 - 1118581

Intron Length:

1684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTAATATTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGTGTTTTAATA

Flanking Amino Acid:

FRDGVKSLLQASGLGRMKPN

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

81.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.9

0.36

1.1

62.2

43.2

Minor 5ss

55.3

0.18

2.7

73.8

36.4

Minor BPS

61.3

0.35

1.3

65.41

35.5

Associated Gene:

Gene:

SLC12A1

Ensembl Gene ID:

ENSAPLG00000007672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008056

1085515 - 1134105

48591