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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11173904_11175302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11173904 - 11175302

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAACTAC

5'SS Class:

major

3'SS Sequence:

TTTGATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTTTGTTTGATT

Flanking Amino Acid:

DAINCLGFTWASSPACTELE

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

81.3

0.7

0.8

73.8

41.4

Minor 5ss

43.1

-0.8

49.9

46.8

Minor BPS

60.4

0.41

1.8

78.01

39.5

Associated Gene:

Gene:

HDC

Ensembl Gene ID:

ENSAPLG00000002933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002984

11171583 - 11181664

10082