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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1125540_1127783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1125540 - 1127783

Intron Length:

2244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAATATA

5'SS Class:

major

3'SS Sequence:

CTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TAGTGATAAAAT

Flanking Amino Acid:

KANRIEEEKLVMASLLSKFR

Intron Amino Acid Position:

975

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

73.4

37.3

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

40.7

-1

2.9

51.6

45.1

Minor BPS

43.5

-0.4

2.3

63.53

46.1

Associated Gene:

Gene:

SLC12A1

Ensembl Gene ID:

ENSAPLG00000007672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008056

1085515 - 1134105

48591