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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1127871_1130437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1127871 - 1130437

Intron Length:

2567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

TCCTTTGCAATT

Flanking Amino Acid:

CDINMKPNKESWKFFEEMIE

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

74.2

0.6

69.3

38.4

Major PPT

80.3

0.68

0.9

77.2

36.4

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

45.2

-0.2

2.1

62.38

43.1

Associated Gene:

Gene:

SLC12A1

Ensembl Gene ID:

ENSAPLG00000007672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008056

1085515 - 1134105

48591