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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11358714_11359943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11358714 - 11359943

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TGGGAATTAACA

Flanking Amino Acid:

VKILPVVGQGGKIRHYVSIS

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

81.8

38.5

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

0.83

0.8

81.7

30.4

Minor 5ss

38.9

-1.2

2.8

43.3

43.8

Minor BPS

49.5

-0

1.9

62.47

43.2

Associated Gene:

Gene:

PDE8A

Ensembl Gene ID:

ENSAPLG00000003946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004109

11253992 - 11380997

127006