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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11365674_11365922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11365674 - 11365922

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTCTTCAACA

Flanking Amino Acid:

SGNEYILSAKQTHQVAGSLI

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.2

0.63

0.9

74.2

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

73.5

0.74

1.4

81.04

34.1

Associated Gene:

Gene:

PDE8A

Ensembl Gene ID:

ENSAPLG00000003946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004109

11253992 - 11380997

127006