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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11371380_11372238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11371380 - 11372238

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACATTCTTAATT

Flanking Amino Acid:

DKCNIFKNMERNEYRTLRQA

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.3

0.59

0.9

73.4

34.9

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

73.6

0.82

1.1

78.58

Associated Gene:

Gene:

PDE8A

Ensembl Gene ID:

ENSAPLG00000003946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004109

11253992 - 11380997

127006