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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11378041_11379000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11378041 - 11379000

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGTCGTAGAATA

Flanking Amino Acid:

GRISEEYFAQTDEEKRQGLP

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

82.8

0.74

0.9

77.1

37.1

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

42.6

-0.5

55.43

37.3

Associated Gene:

Gene:

PDE8A

Ensembl Gene ID:

ENSAPLG00000003946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004109

11253992 - 11380997

127006