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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11410882_11410965_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11410882 - 11410965

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCACCGGC

5'SS Class:

weak_major

3'SS Sequence:

TGAAAGATCAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAAAA

U12 Branch Point Sequence:

AGTGCATCAAAA

Flanking Amino Acid:

GGHPQTVERRCTKQQGLPDE

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

55.9

42.7

Major BPS

59.3

0.23

65.3

28.1

Major PPT

47.9

-0.1

1.2

41.4

41.6

Minor 5ss

27.5

-2.6

4.1

38.8

41.7

Minor BPS

-0.3

1.9

57.91

40.7

Associated Gene:

Gene:

FSD2

Ensembl Gene ID:

ENSAPLG00000004759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004914

11393669 - 11412848

19180