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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11416853_11418811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11416853 - 11418811

Intron Length:

1959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TTTATCCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTTATTTACCT

Flanking Amino Acid:

LARAKEALRLVLQQHKSADT

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

55.4

40.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

74.7

0.56

0.8

67.1

35.3

Minor 5ss

31.1

-2.2

3.4

39.5

41.3

Minor BPS

61.8

0.45

1.8

80.33

41.9

Associated Gene:

Gene:

WHAMM

Ensembl Gene ID:

ENSAPLG00000004963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005131

11415428 - 11429263

13836