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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11420424_11420967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11420424 - 11420967

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

TTTTAATCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTCTCATCT

Flanking Amino Acid:

YFKETVKALTAMQKQMEQDQ

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.8

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.2

0.77

0.8

78.4

34.7

Minor 5ss

38.8

-1.3

2.8

49.6

46.2

Minor BPS

58.8

0.35

1.8

81.56

39.8

Associated Gene:

Gene:

WHAMM

Ensembl Gene ID:

ENSAPLG00000004963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005131

11415428 - 11429263

13836