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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11446539_11449575_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11446539 - 11449575

Intron Length:

3037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTGCATTAATT

Flanking Amino Acid:

LETELQDKELELEELRKQGE

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

66.2

0.37

1.1

66.4

38.4

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

65.1

0.55

1.7

80.74

41.5

Associated Gene:

Gene:

HOMER2

Ensembl Gene ID:

ENSAPLG00000005079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005252

11444936 - 11477737

32802