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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11449687_11452211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11449687 - 11452211

Intron Length:

2525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCCCCG

5'SS Class:

major

3'SS Sequence:

ACATTTCTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CATTTCTTAAAG

Flanking Amino Acid:

KEENDQLRSKIEELEEQCNE

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.3

48.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

67.9

0.4

1.1

67.5

37.4

Minor 5ss

42.3

-0.8

3.2

47.3

Minor BPS

65.9

0.36

1.5

65.42

42.2

Associated Gene:

Gene:

HOMER2

Ensembl Gene ID:

ENSAPLG00000005079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005252

11444936 - 11477737

32802