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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11461339_11477388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11461339 - 11477388

Intron Length:

16050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

TGTTTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTCTAAACA

Flanking Amino Acid:

YRIISVDGAKVIINSTITPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.2

0.54

70.6

39.1

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

70.4

0.64

1.6

79.59

36.6

Associated Gene:

Gene:

HOMER2

Ensembl Gene ID:

ENSAPLG00000005079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005252

11444936 - 11477737

32802