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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11564514_11565495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11564514 - 11565495

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTATCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

RKPPKDPLFYVYAVFAFTSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.9

73.2

35.6

Minor 5ss

46.4

-0.4

2.8

64.2

41.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

TM6SF1

Ensembl Gene ID:

ENSAPLG00000005660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005863

11562299 - 11577155

14857