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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11567603_11577069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11567603 - 11577069

Intron Length:

9467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTAAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTGTGTTTAAAA

Flanking Amino Acid:

IIVFMPGNIVDAGIHVLLCA

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

72.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

67.9

0.4

1.1

60.6

43.8

Minor 5ss

32.1

-2

32.8

41.8

Minor BPS

60.1

0.31

1.9

72.11

40.3

Associated Gene:

Gene:

TM6SF1

Ensembl Gene ID:

ENSAPLG00000005660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005863

11562299 - 11577155

14857