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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11596959_11599790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11596959 - 11599790

Intron Length:

2832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TGTTAAAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTTGAAT

Flanking Amino Acid:

YPIFFFGTHETAFLGPKDLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.3

77.6

32.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

67.8

0.4

1.1

60.6

43.8

Minor 5ss

33.4

-1.9

3.2

39.2

39.9

Minor BPS

71.5

0.76

1.3

87.4

31.4

Associated Gene:

Gene:

HDGFL3

Ensembl Gene ID:

ENSAPLG00000005715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023378

11596147 - 11622576

26430

ENSAPLT00000005905

11593592 - 11622106

28515