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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11599868_11622022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11599868 - 11622022

Intron Length:

22155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TCTGTAGTAATC

Flanking Amino Acid:

MKGYPHWPARIDELPEGAVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

85.7

0.8

79.8

32.3

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

44.6

-0.4

2.2

58.09

41.7

Associated Gene:

Gene:

HDGFL3

Ensembl Gene ID:

ENSAPLG00000005715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023378

11596147 - 11622576

26430

ENSAPLT00000005905

11593592 - 11622106

28515