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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1180962_1183424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1180962 - 1183424

Intron Length:

2463

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

AAACAGTTAACA

Flanking Amino Acid:

LQHYQWNQCVDENECLSAHI

Intron Amino Acid Position:

2562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.1

73.4

40.1

Major BPS

0.52

1.1

77.7

35.3

Major PPT

81.9

0.72

0.8

72.9

37.4

Minor 5ss

24.3

-3

3.7

32.4

36.1

Minor BPS

47.2

-0.2

2.2

39.7

Associated Gene:

Gene:

FBN1

Ensembl Gene ID:

ENSAPLG00000005565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006009

1177298 - 1339247

161950