Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_11832446_11832943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11832446 - 11832943

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCCAT

5'SS Class:

major

3'SS Sequence:

GACTCCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TGTTATCTGACT

Flanking Amino Acid:

YRKMLEGEEQRLKLSPSPSS

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.1

68.8

43.8

Major BPS

72.5

0.56

1.2

63.4

Major PPT

71.2

0.48

0.9

39.5

Minor 5ss

38.1

-1.3

3.4

55.3

48.9

Minor BPS

54.3

0.21

1.9

77.9

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006610

11828063 - 11841495

13433